FastQCFastQC Report
Thu 15 Dec 2022
EGAF00007544367

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007544367
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences925513
Sequences flagged as poor quality0
Sequence length51
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT26090.28189771510502826No Hit
ACAAAACATACAGGCAAATTTGTATTCTGTGAGTTTCTCACACCCTCACAC17020.1838980111570556No Hit
CCAAAATCAAGTGGGGCGATGCTGGCGCTGAGTACGTCGTGGAGTCCACTG16660.18000827649098392No Hit
CAAAACATACAGGCAAATTTGTATTCTGTGAGTTTCTCACACCCTCACACT14220.1536445193098314No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT14040.15169965197679558No Hit
CCCCTCTTCAAGGGGTCTACATGGCAACTGTGAGGAGGGGAGATTCAGTGT11030.11917714824102957No Hit
ACTTTATTGATGGTACATGACAAGGTGCGGCTCCCTAGGCCCCTCCCCTCT9500.10264577591022493No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)