FastQCFastQC Report
Wed 8 May 2024
EGAF00007544416

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007544416
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1052609
Total Bases53.6 Mbp
Sequences flagged as poor quality0
Sequence length51
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT24360.23142496406547922No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT14680.13946299148116728No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)