FastQCFastQC Report
Thu 15 Dec 2022
EGAF00007544456

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007544456
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences488821
Sequences flagged as poor quality0
Sequence length51
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT16960.3469572706573572No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT9260.1894353965971184No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)