FastQCFastQC Report
Fri 16 Dec 2022
EGAF00007544551

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007544551
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences58092254
Sequences flagged as poor quality0
Sequence length51
%GC37

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTAGGTCCTACAAGATCGGAAGAGCACACGTCTGAACTCCAGTCACTAGG2138710.3681575171794849TruSeq Adapter, Index 7 (97% over 36bp)
AGAAGGTCCTTCTAGATCGGAAGAGCACACGTCTGAACTCCAGTCACTAGG1898380.32678711347643696TruSeq Adapter, Index 7 (97% over 36bp)
CCATAGTCTATGGAGATCGGAAGAGCACACGTCTGAACTCCAGTCACTAGG768840.1323481096119975TruSeq Adapter, Index 7 (97% over 36bp)

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)