FastQCFastQC Report
Fri 16 Dec 2022
EGAF00007544555

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007544555
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences58975910
Sequences flagged as poor quality0
Sequence length51
%GC37

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGAAGGTCCTTCTAGATCGGAAGAGCACACGTCTGAACTCCAGTCACCAGA1712810.29042536181298434TruSeq Adapter, Index 7 (100% over 37bp)
TGTAGGTCCTACAAGATCGGAAGAGCACACGTCTGAACTCCAGTCACCAGA672230.11398382831227191TruSeq Adapter, Index 7 (100% over 37bp)
GTGAGGTCCTCACAGATCGGAAGAGCACACGTCTGAACTCCAGTCACCAGA664200.11262225542598664TruSeq Adapter, Index 7 (100% over 37bp)

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)