FastQCFastQC Report
Thu 15 Dec 2022
EGAF00007544569

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007544569
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences650934
Sequences flagged as poor quality0
Sequence length51
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT10820.16622268924345632No Hit
GCTAAGGGAGGGTAGACTGTTCAACCTGTTCCTGCTCCGGCCTCCACTATA10730.1648400605898601No Hit
TCATAATCGGAGGCTTTGGCAACTGACTAGTTCCCCTAATAATCGGTGCCC10490.16115305084693687No Hit
CCTTATTCGAGCCGAGCTGGGCCAGCCAGGCAACCTTCTAGGTAACGACCA10360.1591559205695201No Hit
CCTAATTGGGGGGTAGGGGCTAGGCTGGAGTGGTAAAAGGCTCAGAAAAAT7520.11552630527826169No Hit
CCCTTAGCAGGGAACTACTCCCACCCTGGAGCCTCCGTAGACCTAACCATC7330.11260742256511413No Hit
CCTCATACTAGGCCTACTAACCAACACACTAACCATATACCAATGATGGCG6620.10170001874229952No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)