FastQCFastQC Report
Thu 15 Dec 2022
EGAF00007544575

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007544575
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences210329
Sequences flagged as poor quality0
Sequence length51
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT34511.6407628049389291No Hit
GATAGATAGGAGAGTTGTAACACAGGACAGAGATAACACAGATGATACTGC32191.5304594230942952No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT14400.684641680414969No Hit
GCTTTCTTCGAGCCTTTTCGCCTTCCTTCCTCGTCTAACCATGTCGACCTG6950.33043469992250235No Hit
GTGCGTGAAGAAGGGAAACAGCTACGGTATCGATATTGTTGAGACCGAGAA6040.2871691492851675No Hit
GGATAGATAGGAGAGTTGTAACACAGGACAGAGATAACACAGATGATACTG5830.27718479144578256No Hit
GCTTTCTTCGAGCCTCTTCGCCTTCCTTCCTCGTCTAACCATGTCGACCTG4610.2191804268550699No Hit
GCGGCAACTGCGACTGCGTTGACAAGAGCCAGTGCGTGAAGAAGGGAAACA4380.2082451777928864No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA4140.19683448311930357No Hit
ACGTCGACGAGGTGATCGTTGCCGCAGAAGCTGCCGAGCATGACGGCAAGT3880.18447289722292218No Hit
CCCGATTGGGGCTGCATTCCCAAACAACCCGACTCGTCGACAGCGCCTCGT3680.1749639849949365No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC3250.1545198237047673No Hit
CCTCGTCTAACCATGTCGACCTGCGGCAACTGCGACTGCGTTGACAAGAGC3120.14833903075657662No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT2510.11933684846122028No Hit
GAGTGAATGGGGCGGTTCAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA2400.11410694673582816No Hit
AGAAGAGCTACGTCGACGAGGTGATCGTTGCCGCAGAAGCTGCCGAGCATG2390.11363150112442887No Hit
GGTCAGGTGGGGCTACCCGCTGAGTTTAAGCATATAAATAAGCGGAGGAGA2320.1103033818446339No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA2160.10269625206224534No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)