FastQCFastQC Report
Thu 15 Dec 2022
EGAF00007544787

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007544787
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1922107
Sequences flagged as poor quality0
Sequence length51
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TCATAATCGGAGGCTTTGGCAACTGACTAGTTCCCCTAATAATCGGTGCCC25880.13464390900194423No Hit
GCTAAGGGAGGGTAGACTGTTCAACCTGTTCCTGCTCCGGCCTCCACTATA21580.11227262582155935No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)