FastQCFastQC Report
Thu 15 Dec 2022
EGAF00007544824

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007544824
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences132999
Sequences flagged as poor quality0
Sequence length51
%GC56

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGTTGTAGCCACAGCTGGAGCCTGAGTCCGCTGCACGGAGACTCTGGTGT20771.5616658771870466No Hit
CCGAAAGGTATCGTTATCTGAATACATAGGGTAACGAGGCGAACCGGGTGA12150.9135407033135587No Hit
GCTATGGCCAGCCTTTCCAAGCTGTTCCGTTATGTCTTGTGCTATCACTAA8670.651884600636095No Hit
GCACCCAGGGGCACTGGCATCGTCTCCGCACCTGTGCCTAAGAAGCTGCTC7810.5872224603192505No Hit
CCTTTGATGCCATTTCTAAGACCTACAGCTACCTGACCCCCGACCTCTGGA4530.3406040646922157No Hit
TCATAATCGGAGGCTTTGGCAACTGACTAGTTCCCCTAATAATCGGTGCCC4380.32932578440439403No Hit
GCTAAGGGAGGGTAGACTGTTCAACCTGTTCCTGCTCCGGCCTCCACTATA4030.30300979706614334No Hit
CATATTCAGACAGGATTTCTCGTGTCCCGCCCTACTTGTCGTTAGCTCAGT3840.28872397536823585No Hit
GGTTGAGCCCGGGGATTTCACAACTGTCTTACATCACCGCCTGCGCACGCT3420.2571447905623351No Hit
GCTGCGGCTCTGTGCTGGTACGCCTCATCCCTGCACCCAGGGGCACTGGCA3360.25263347844720635No Hit
GCGATAAGCTTCGGGGAGCTGGCAAATTAGCTTTGATCCGGAGATTTCCGA3280.2466183956270348No Hit
CATGATGGCTGGTATCGATGACTGCTACACCTCAGCCCGGGGCTGCACTGC3010.22631749110895572No Hit
CCTGATAGGGAGACTTGGTGAATACAGTCTCCTTCCAGAGGTCGGGGGTCA2890.21729486687869834No Hit
GCTGATGTCAGTGTTATATCCTCCAGGAATACTGGCCAGAGGGCTGTGCTG2740.20601658659087663No Hit
CTGAGTGAGCTCCCTTGTTGTTGCATGGGATGGCAATGTCCACATAGCGCA2740.20601658659087663No Hit
CCTAATACGTAGTTAAGTTGAACAAACGAGGTGAGACTTCAATAACAGCCA2710.20376093053331226No Hit
CCAGAGGTCGGGGGTCAGGTAGCTGTAGGTCTTAGAAATGGCATCAAAGGT2650.1992496184181836No Hit
GCATTGCTGCAGGGTACGCTTTATCCCGAAGTTACAGCGTCAATTTGCCTA2580.19398642095053348No Hit
GGCCATAGCGGGTGATAGCCCCGTACGTGAAATGACCTGTGTGGTACTGAG2520.18947510883540478No Hit
GACTCTGGTGTGGGTCTTGACGAGGTGGTCAGTGAACTCCTGATAGGGAGA2400.18045248460514743No Hit
ACCCATTCTCCTAGTTTCTTGTTGTCATCAACCTTAATTAGGTTGATTTGG2390.17970059925262596No Hit
GCATGAACGGGTTGCAAAAAATCGGTGGCTGCGACTGTTTATTAAAAACAC2390.17970059925262596No Hit
CCTTATTCGAGCCGAGCTGGGCCAGCCAGGCAACCTTCTAGGTAACGACCA2300.17293363107993293No Hit
ACCTTAGGACCGTTATTGTTACGGCCGCCGTTTACTGGGACTTCAATCAAG2220.16691854825976135No Hit
GTTATAAAAGAGGTTTAGTCAAAAAGACCAAAGCCCATGTCATCATCAGAC2160.16240723614463268No Hit
GGGCTCAACCTGGGAACTGCATCTGTGACTGCATCGCTGGAGTACGGCAGA2030.15263272656185384No Hit
CATCAAAGGTGGCCTTGGCGAAGTTGCCCAGGGTGGCAGTGCAGCCCCGGG2020.1518808412093324No Hit
CACACTGTCCCTTGCAAGGTGACAGGCCGCTGCGGCTCTGTGCTGGTACGC2000.1503770705042895No Hit
GCAAATTGACACCGTAACTTCGGAAGAAGGTGTGCCCTATTAGTGTGAAGT1960.1473695290942037No Hit
CCATATTCAGACAGGATTTCTCGTGTCCCGCCCTACTTGTCGTTAGCTCAG1940.14586575838916083No Hit
CATTAAAGCAGCCGGTGTAAATGTTGAGCCTTTTTGGCCTGGCTTGTTTGC1910.1436101023315965No Hit
GCTAAGTTGGTTGCTTTTTGGTGATTAGTCAAAGAGACCAAATCCCATATC1880.14135444627403215No Hit
GCTCATGATGGCTGGTATCGATGACTGCTACACCTCAGCCCGGGGCTGCAC1880.14135444627403215No Hit
CCCAATCGTGGGGGATAACGCAGCGAAAGCTGTGCTAATACCGCATACGAT1780.13383559274881765No Hit
CCTAAGGTAGCGAAATTCCTTGTCGGGTAAGTTCCGACCTGCACGAATGGC1720.12932428063368898No Hit
GTTCTTGGGTGGGTGTGGGTATAATACTAAGTTGAGATGATATCATTTACG1720.12932428063368898No Hit
ACTGATCGCAGGCTTGGTGGGCCTCTACCCCACCAACTACCTAATCAGACG1710.12857239528116754No Hit
CCTTTTTCCAGGCTTTAGGTATCACCACTAAAATCTCCAGGGGCACCATTG1680.12631673922360317No Hit
GGCAGCAGTGGGGAATTTTGGACAATGGGCGCAAGCCTGATCCAGCCATGC1650.12406108316603884No Hit
ACACTGTCCCTTGCAAGGTGACAGGCCGCTGCGGCTCTGTGCTGGTACGCC1630.12255731246099595No Hit
GCAAGGTGACAGGCCGCTGCGGCTCTGTGCTGGTACGCCTCATCCCTGCAC1620.1218054271084745No Hit
CCGATTATGATGGGTATTACTATGAAGAAGATTATTACAAATGCATGGGCT1610.12105354175595305No Hit
ATCAAAGGTGGCCTTGGCGAAGTTGCCCAGGGTGGCAGTGCAGCCCCGGGC1550.11654222964082436No Hit
CTTGACGAGGTGGTCAGTGAACTCCTGATAGGGAGACTTGGTGAATACAGT1540.11579034428830291No Hit
GTGGACTACCAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCATG1540.11579034428830291No Hit
CCACTTTACGGGGTTTCCCCTCTCTGTCAATTTTACAAAGGCCTACCCATT1530.11503845893578146No Hit
CCGCTTGTGCGGGTCCCCGTCAATTCCTTTGAGTTTCAACCTTGCGGCCGT1520.11428657358326003No Hit
CCTCAATCTGGGCCTGTCTGTTCTGAATGGTCAGTTTCACTGTAATCCTCA1520.11428657358326003No Hit
CCAACGTTGTAGGCCCCTACGGGCTACTACAACCCTTCGCTGACGCCATAA1490.11203091752569569No Hit
GATCAGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTATCCATGGCCAGG1480.11127903217317424No Hit
GCTATTTCCAAGTTTGTTTAGCCTTTCACCCCTATCCACAGCTCATCCGCT1460.10977526146813135No Hit
CCCTTAGCAGGGAACTACTCCCACCCTGGAGCCTCCGTAGACCTAACCATC1430.10751960541056699No Hit
TCCAGAGGTCGGGGGTCAGGTAGCTGTAGGTCTTAGAAATGGCATCAAAGG1390.1045120640004812No Hit
GCCATCATGAGCAGCTTCTTAGGCACAGGTGCGGAGACGATGCCAGTGCCC1380.10376017864795975No Hit
ACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTG1360.10225640794291686No Hit
GCTCACTCAGTGGGTTTGATGTGGTGGATGCTGGCTCGGGAAGTTCTGCGC1350.10150452259039541No Hit
ACGTATTACCGCGGCTGCTGGCACGTAGTTAGCCGGTGCTTATTCTTACGG1340.10075263723787398No Hit
GGTGCAGCGGGGGGGCCCGGGGGCCCTGGTGGCCCTGGGATGGGGAACCGC1340.10075263723787398No Hit
CCGCCATGGCCGAGGAAGGCATTGCTGCTGGAGGTGTAATGGACGTTAATA1340.10075263723787398No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)