FastQCFastQC Report
Thu 15 Dec 2022
EGAF00007545223

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007545223
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences153666
Sequences flagged as poor quality0
Sequence length43-51
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TCATAATCGGAGGCTTTGGCAACTGACTAGTTCCCCTAATAATCGGTGCCC8150.5303710645165488No Hit
GCTAAGGGAGGGTAGACTGTTCAACCTGTTCCTGCTCCGGCCTCCACTAT6000.39045722541095623No Hit
CCTTATTCGAGCCGAGCTGGGCCAGCCAGGCAACCTTCTAGGTAACGACC3080.20043470904429084No Hit
CCTAATTGGGGGGTAGGGGCTAGGCTGGAGTGGTAAAAGGCTCAGAAAAAT2140.13926307706324104No Hit
CCGATTATGATGGGTATTACTATGAAGAAGATTATTACAAATGCATGGGCT1950.12689859825856079No Hit
CCTCATACTAGGCCTACTAACCAACACACTAACCATATACCAATGATGGCG1860.12104173987739643No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)