FastQCFastQC Report
Thu 15 Dec 2022
EGAF00007545309

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007545309
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22766
Sequences flagged as poor quality0
Sequence length44-51
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTAATTGGGGGGTAGGGGCTAGGCTGGAGTGGTAAAAGGCTCAGAAAAAT500.21962575770886408No Hit
GCTAAGGGAGGGTAGACTGTTCAACCTGTTCCTGCTCCGGCCTCCACTAT290.12738293947114118No Hit
TCATAATCGGAGGCTTTGGCAACTGACTAGTTCCCCTAATAATCGGTGCCC280.12299042431696389No Hit
GTCCAACCCTGTGATGATTGATGCCACTGCTTCCCATGTACTCTGCGTTG250.10981287885443204No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)