FastQCFastQC Report
Thu 15 Dec 2022
EGAF00007545325

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007545325
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences214964
Sequences flagged as poor quality0
Sequence length39-51
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TCATAATCGGAGGCTTTGGCAACTGACTAGTTCCCCTAATAATCGGTGCCC8670.4033233471651067No Hit
GCTAAGGGAGGGTAGACTGTTCAACCTGTTCCTGCTCCGGCCTCCACTAT5810.2702778139595467No Hit
CCTTATTCGAGCCGAGCTGGGCCAGCCAGGCAACCTTCTAGGTAACGACC3390.15770082432407287No Hit
CCTAATTGGGGGGTAGGGGCTAGGCTGGAGTGGTAAAAGGCTCAGAAAAAT3050.14188422247446084No Hit
CCTCATACTAGGCCTACTAACCAACACACTAACCATATACCAATGATGGCG2380.1107162129472842No Hit
CCGATTATGATGGGTATTACTATGAAGAAGATTATTACAAATGCATGGGCT2240.10420349453862043No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)