FastQCFastQC Report
Thu 15 Dec 2022
EGAF00007545543

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007545543
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13472
Sequences flagged as poor quality0
Sequence length41-51
%GC54

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1441.0688836104513064No Hit
CCGAAAGGTATCGTTATCTGAATACATAGGGTAACGAGGCGAACCGGGTG170.126187648456057No Hit
GCTTGTTAGGAAGGCTGTGGCCATCTTTGTTTCTGAAACAGTCTTATCTC140.10391923990498812No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)