FastQCFastQC Report
Thu 15 Dec 2022
EGAF00007545595

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007545595
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1065
Sequences flagged as poor quality0
Sequence length46-51
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG726.760563380281689No Hit
GCATAAGGTAGTGCTGAGCTAAATCTGAGATGCCCTTTTCAGTGATGACC90.8450704225352111No Hit
CGCAGAGTGCTGGGATTACAGGTGTGAGCCACTGTGCGTGGACTGCGCTGG50.4694835680751174No Hit
GTGATATTGGCCCGCATAAGGTAGTGCTGAGCTAAATCTGAGATGCCCTTT50.4694835680751174No Hit
GCGGATGGCTGTGATATTGGCCCGCATAAGGTAGTGCTGAGCTAAATCTG40.3755868544600939No Hit
GACAATATGAACCGCTTTGACCGACCAGACAGAAATGTTCGGCAGCCTC40.3755868544600939No Hit
GTTTTCAGAAAGGGCTTCTTGCTGTCTCCTAAGAATTCATCCAGTTACCA40.3755868544600939No Hit
GGAACAGGAGCAGGCCTGTTGGAAATCAAGAAAATTGGAGATGAATACTTT40.3755868544600939No Hit
GGCTATGTTCCCCGAGTTGGCCACTGGAGATTCTGATGGAGCAGGTGCATG30.28169014084507044No Hit
CTCTCGGCCTCCAGAAAGGCCTGGCTTGGGATGAAGTAGTCATCACTTGC30.28169014084507044No Hit
GCCAACGAGCGCATGGACTGGCTGGTCGAGAAGGCGACCGAACTCGGCGTG30.28169014084507044No Hit
CCTCACAGAGCTGCTGGATGTACTCTTCCTCCATCTGGAGAATTCGGGTG30.28169014084507044No Hit
GCACCCAGGGGCACTGGCATCGTCTCCGCACCTGTGCCTAAGAAGCTGCTC30.28169014084507044No Hit
CCGCGCAGCCCGCGTCGTTGGCCAGCTGGCGGCACAGCACGTCGTGCGTGT30.28169014084507044No Hit
GCACTTTGGGAGGCCGAGGCGGATGGATCACGACGTCAGGAGTTCGAGACC30.28169014084507044No Hit
CCTCTCGTGTAATCTCAATGTCAGTCTGGCTTTCTCCTTTCTTGTATTCC30.28169014084507044No Hit
GCTGGATGTACTCTTCCTCCATCTGGAGAATTCGGGTGAAGTCCTCCTCTC30.28169014084507044No Hit
GATCGAGGATGTCGCAACACTCACCCCTCTCGACATGGCGGCAAGCAAGCT30.28169014084507044No Hit
GTCCAGATTCTCTTTATTCATCTTCGTAGCCAGTTGGAAGTGGATTCACAT30.28169014084507044No Hit
CTTGACGCGGGCCAGTTCGGCCTCGCCCACGCCTTCCTTGGCGATGCGCGC20.18779342723004694No Hit
CCCAAATACTTAGGAGGCTGAGGTGGAAGGATCACTTGAGCCCAGGAGGTC20.18779342723004694No Hit
CCCTCATCTTCCCTTGAGAGCTTCAGTCTTTATGCACACATAACACAAAC20.18779342723004694No Hit
CGCAGAGTGCTGGGATTACAGGCATGAGCCACCACTCCTGGCCCTTGCCTT20.18779342723004694No Hit
GCGCAATCTCGGCTGACTGCAAGCTCCGCTTCCCGGGTTCACGCCATTCTC20.18779342723004694No Hit
CTCTGCGGATGGCTGTGATATTGGCCCGCATAAGGTAGTGCTGAGCTAAAT20.18779342723004694No Hit
ACCCTCTGGGGCTCTGCGGCGCTTAAGAGGCGGCCGCAGCGGCGGATCCGG20.18779342723004694No Hit
GTGGGGCCCGGATAGTCAGCCGACCAGAGGAACTGAGAGAAGATGATGTTG20.18779342723004694No Hit
CAAGGCCTGCACCATTCTCCTCCGGGGGGCTAGCAAAGAGATTCTTCTCTG20.18779342723004694No Hit
GGCTCAGCTCGCATGTGGAAGACTCTCACCTTCTTCGTCGCGCTCCCCGGG20.18779342723004694No Hit
GGACAGGGCGGCGTAGTTGGCCGAGTCGATGGGCACCACGGCCATCTTGGG20.18779342723004694No Hit
GCCGCACTCCGAATTCACCATCTACGGCCTGGGCATCTTCGCGATGTTCT20.18779342723004694No Hit
CTCCCTACTTAGATGTTTCAGTTCAGGAGGTTGGCTCTCTTTCGAGTATAC20.18779342723004694No Hit
GATTAGGTCTGGCTATGTTCCCCGAGTTGGCCACTGGAGATTCTGATGG20.18779342723004694No Hit
GGAATACAAGAAAGGAGAAAGCCAGACTGACATTGAGATTACACGAGAGG20.18779342723004694No Hit
GTCCTTCACCAGGTTATGTAAGGGTGTATGTCCACTGCTTGAACCCTGA20.18779342723004694No Hit
TCTGAGATGCCCTTTTCAGTGATGACCACATCGGGCTTCAGTTGGATAATG20.18779342723004694No Hit
CATCACCAACCATAAGATCCTTGATTTCAATGTTTCCCACTTTGGTGGTTG20.18779342723004694No Hit
GCGCTGACGGGCCCGAGCGGCAGCGGCAAGACCGCGTTGCTGTCGATGATC20.18779342723004694No Hit
GGTGCCCGGGTAGTGGTCCAGATTCTCTTTATTCATCTTCGTAGCCAGTTG20.18779342723004694No Hit
ACCAGAGGAACTGAGAGAAGATGATGTTGGAACAGGAGCAGGCCTGTTGG20.18779342723004694No Hit
GCTTCATGGGGAAACCTTGTTTGTCGTTCCCACCACTGATTCGGACCACAT20.18779342723004694No Hit
GCACATGGACCAGAAAAAGTATATGGGACCTTAAGCTCACCTTCTTTACTT20.18779342723004694No Hit
CACCATGAGTGGCTCTAGCTTGGACTCCGTTGGTCGTAGGGGAGTTGGTA20.18779342723004694No Hit
AATAAGTGATGAACATCTGCTTTATATTCCAACTGCCATGGGATTCAAATT20.18779342723004694No Hit
GGATCAAGCGGGATATCATGTCCATTTATAAGGAGCCTCCTCCAGGAATGT20.18779342723004694No Hit
TACATGGGCGGCGAGTGGTGAACGGGTGAGTAATACATCGGAACGTGCCC20.18779342723004694No Hit
TCTCCTCCGGGGGGCTAGCAAAGAGATTCTTCTCTGGAATACAAGAAAGG20.18779342723004694No Hit
AAGGCCTGCACCATTCTCCTCCGGGGGGCTAGCAAAGAGATTCTTCTCTGG20.18779342723004694No Hit
CTGACTGAGCCACAGACATCAAGAAAAATTTCATTAGAGATGATGGAGG20.18779342723004694No Hit
CGAAGAAGGAGGCTGGAGAGACCAGGATCCTTCCAGCTGAACAAAGTCAGC20.18779342723004694No Hit
GCTGCAAAATAAGGAAAGTGAAGTGCTTGAGGGGGCAGAACGTGTAAGGC20.18779342723004694No Hit
GGTGGCAGTCAGCATGCTGAATGTGTACCTGAAGTCGCACCACGGAGAGC20.18779342723004694No Hit
TCACCCAAATCAAGTTTTTTGGGGTCGAGGTGCCGTAAAGCACTAAATCGG20.18779342723004694No Hit
GCCAGTTGGAAGTGGATTCACATGAGGGTTATGGAATAGAGTATGGTTACC20.18779342723004694No Hit
AGCGACATCGGCATGGTGTAGCCGAAGAGCGCCGGCTTCAGCGGCCACAGC20.18779342723004694No Hit
ACTATGAGGAAGTGCAGCCCAAGGGCTTCTTCCGCCTGTTCCCCGGCAAC20.18779342723004694No Hit
CCCCGAGTTGGCCACTGGAGATTCTGATGGAGCAGGTGCATGGTGGTCCCT20.18779342723004694No Hit
CCATCATCTCCTGCTGTGTGGCCACCATCTCGCGCTCCTTGCGTTCGGGG20.18779342723004694No Hit
CTCTTTGTGAGGCATGCTGGGAGGAGGAGGAGTGGTAATCACGCCTTGGCT20.18779342723004694No Hit
GCTCAAATGATACAGGATAAACTGGGATGGGCTATCAAACCCAGAGCAGCC20.18779342723004694No Hit
GAGGCAGCGAGGCGCAGCGAGCCTAGCCTCCCCGCGCCCTGGGCAGTGTGG20.18779342723004694No Hit
CTTCTGGTCGGCCAGCGCGTCGCGCGCCTGGTCGACGAAGGCCATCTTCAC20.18779342723004694No Hit
GGTAACCATCGGACTCGAAGCCTATACGGCGGGCTAGACTCCGGCAAAG20.18779342723004694No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)