FastQCFastQC Report
Thu 15 Dec 2022
EGAF00007545687

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007545687
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences608054
Sequences flagged as poor quality0
Sequence length36-51
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TCATAATCGGAGGCTTTGGCAACTGACTAGTTCCCCTAATAATCGGTGCCC25390.41756159814753296No Hit
GCTAAGGGAGGGTAGACTGTTCAACCTGTTCCTGCTCCGGCCTCCACTAT18250.3001378167070688No Hit
CCTTATTCGAGCCGAGCTGGGCCAGCCAGGCAACCTTCTAGGTAACGACC11970.19685751594430756No Hit
ACAGATGATAGGATGTTTCATGTGGTGTATGCATCGGGGTAGTCCGAGTA6980.11479243619810084No Hit
CCGATTATGATGGGTATTACTATGAAGAAGATTATTACAAATGCATGGGCT6330.10410259615099973No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)