FastQCFastQC Report
Thu 15 Dec 2022
EGAF00007545746

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007545746
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1419
Sequences flagged as poor quality0
Sequence length46-51
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTAATGACCTCCGGCCTAGCCATGTGATTTCACTTCCACTCCATAACGCT40.28188865398167723No Hit
CCTTGCCGACCTCGTCGTTGTCGGCCGGCCGGTCGCTCTCGGGCACGGGGC30.21141649048625794No Hit
ACACATGTAAGACTCCTTCTGCTGAAACACAGTACTGAGAATTCAGTGAGG30.21141649048625794No Hit
GACCTGAGGAGGACAGCCTTGGGAAGAGTGCAGAGAGGCTCATGGTGCAAC20.14094432699083861No Hit
GCTGTCCAGGGAGGTCTTCAAAGGAGGCACGGTCAGTGAAGGAGAAGAGG20.14094432699083861No Hit
CCATACGCATCTCTAACGCAGAACCTCCATACGTATCTCTAACGCAGAACC20.14094432699083861No Hit
GCGCCACATAGGCGGTGGTGGCAACATTCTCCTGGGAGGGCTGAATCTCCT20.14094432699083861No Hit
GCTAAGGGAGGGTAGACTGTTCAACCTGTTCCTGCTCCGGCCTCCACTAT20.14094432699083861No Hit
GCACTTTGGGATGCTGAGGTGGGTGGATTGCCTGAGGTCAGGCTGTCTCTT20.14094432699083861No Hit
CCCAGCTAACAAATAGGAAATCAGACAAGTTAAGTAACTTGCCAAAGTCA20.14094432699083861No Hit
CCAGTAGTGGTGGACTTGCCCGAATCTACGTGTCCAATGACGACAATGTTG20.14094432699083861No Hit
CTCAGGGAAGCCGGCTGAAGGCAACAAGCCCACATCTACAGCTGTCTCTT20.14094432699083861No Hit
GAAATCAGTGAATGAAGCCTCCTATGATGGCAAATACAGCTCCTATTGAT20.14094432699083861No Hit
CCATTTGGATACATAGGTATGGTCTGAGCTATGATATCAATTGGCTTCCT20.14094432699083861No Hit
CCTTAGTCAGCTTCGAGATGTTAGGAAGCCTGATGGCTCGACTGAACATGT20.14094432699083861No Hit
CCACACACCACCTGTCCAAAAAGGCCTTCGATACGGGATAATCCTATTTAT20.14094432699083861No Hit
GCCCAGTGGTTCAGACTGCTGGTGGCACATGCCTGAGGTCCCGGCTACTCG20.14094432699083861No Hit
CCCTTAGCAGGGAACTACTCCCACCCTGGAGCCTCCGTAGACCTAACCATC20.14094432699083861No Hit
TCATAATCGGAGGCTTTGGCAACTGACTAGTTCCCCTAATAATCGGTGCCC20.14094432699083861No Hit
CCCAATGTATGGGATGGCGGATAGTAAGTTTGTAATTACTGTGGCCCCTC20.14094432699083861No Hit
GCGAGGAAGCCAAGTTTAACGTGTGTGCTCCACTCCTCCAACCTGGCCAA20.14094432699083861No Hit
CCCTTCCACCGCCATATTGGGCCACTAAAAAAAGGCGAGCCAGCGCAAGTG20.14094432699083861No Hit
GCCTAGTCCTTGCGTCACTGTCCATGGGCAATTCCTCTGCCCTGCATCTTC20.14094432699083861No Hit
CACATGACGGCCGGGCGCGGTGGCTCACGCCTGTAATCTCACCACTTTGGG20.14094432699083861No Hit
CTCTCCAGGAGGGTCTTCAGGATCTCATCCACACAGCCACCTTGGTGACCT20.14094432699083861No Hit
TTTGTTTATGGGGTGATGTGAGCCCGTCTAAACATTTTCAGTGTATTGCTT20.14094432699083861No Hit
CCTTTCTCCACTACTCTAAATCAACAAGCTGGTAGAACTGAATGCTTCAC20.14094432699083861No Hit
GTTTCTACCACCGCATCCTCACTGGGCTCACTGCAGGCATGCTGAACAAGG20.14094432699083861No Hit
AGGAATGGGGTGGGTTTTGTATGTTCAAACTGTCATTTTATTTTTACGTTG20.14094432699083861No Hit
GCTATCGCCCGGGTCCTACCTGCTCGAGGCCGAAGCCTGCTGGTGGTGGGC20.14094432699083861No Hit
GGGGAGGCCGGGATCCAGACGCCTCCTGGGGCTGCTGGCGGAGGGTCTG20.14094432699083861No Hit
CCTGCTCCTGGGTCTGGGCATTCTGCTCATCGACAGCTTTTTCTGTGTGTT20.14094432699083861No Hit
CTTATGTGGCAACCTTAATAGTGATGGACTGATTGGGAAGAAAGGAAGCCC20.14094432699083861No Hit
CTCCTGATGGTGAATATTTTGCTACTGCTGGAAAGGATGATTGTCTTTTG20.14094432699083861No Hit
GAGTTATAGTGGTCTCATGTGAATTCAGCTTTTGTTGTTTCAGCAACTCTT20.14094432699083861No Hit
CCTTACATGAGGATGAGAGTTCTGGCATCTCAAGGTATGAAGGTCAAGTCC20.14094432699083861No Hit
TATTAATACAAGGGGTTTGAACTGGACATCCTAATGATGCAATTACGTCAT20.14094432699083861No Hit
CCCATAGGTGTGGCTCGTGGCTGGGTGACTTGCTTCTGCCAATGAGATTTT20.14094432699083861No Hit
GCTGATGTAGACCCTCTCACCATTACTTCATCCCTGTCATCTGATGGGGTC20.14094432699083861No Hit
ACATCAGCCCTTTATTTCACCAGTAGGGAAGCTGGGACAGAGAGTAGTTAC20.14094432699083861No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)