FastQCFastQC Report
Thu 15 Dec 2022
EGAF00007545908

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007545908
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences867618
Sequences flagged as poor quality0
Sequence length51
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACTGAGGCGAGCGGTCAAACCCGATCCTCGATTGGTGCAGCATGATACCAA9580.11041725736441613No Hit
GTAATGATGTCGGGGTTGAGGGATAGGAGGAGAATGGGGGATAGGTGTATG9290.10707477253814467No Hit
ACAGATGATAGGATGTTTCATGTGGTGTATGCATCGGGGTAGTCCGAGTAA9130.10523064297882248No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)