FastQCFastQC Report
Thu 15 Dec 2022
EGAF00007546319

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007546319
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences555354
Sequences flagged as poor quality0
Sequence length51
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCTATTAGAAGGATTATGGATGCGGTTGCTTGCGTGAGGAAATACTTGAT8830.1589976843598858No Hit
CCACAATCCTAGGCCTACCCGCCGCAGTACTGATCATTCTATTTCCCCCTC7790.1402708902789932No Hit
ACTACTATCTCGCACCTGAAACAAGCTAACATGACTAACACCCTTAATTCC7390.13306827717095762No Hit
GGCCCAACCCGTCATCTACTCTACCATCTTTGCAGGCACACTCATCACAGC6110.11001991522524372No Hit
GTTAGATATGGGGAGTAGTGTGATTGAGGTGGAGTAGATTAGGCGTAGGTA5970.10749900063743126No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)