FastQCFastQC Report
Thu 15 Dec 2022
EGAF00007546785

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007546785
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2451
Sequences flagged as poor quality0
Sequence length45-51
%GC58

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGTTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG351.4279885760913913No Hit
GGGGGGCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG301.2239902080783354No Hit
GGGGGGGTGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG60.24479804161566704No Hit
GGGGGTGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG40.1631986944104447No Hit
GGGGGGGGTCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG40.1631986944104447No Hit
CTTCCAACAAGCATGTAGGCAGATACTCAAATGACATTCAGGAACTCTAAT30.12239902080783352No Hit
ATACACATCTCCGAGCCCACGAGACTCCTGAGCATCGCGTATGCCGTCTTC30.12239902080783352RNA PCR Primer, Index 26 (95% over 23bp)
ACCCTTGACCGAAGACCGGTCCTCCTCTATCGGGGATGGTCGTCCTCTTCG30.12239902080783352No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)