FastQCFastQC Report
Thu 15 Dec 2022
EGAF00007546889

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007546889
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4455
Sequences flagged as poor quality0
Sequence length47-51
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTATACACATCTCCGAGCCCACGAGACTAGGCATGATCTCGTATGCCGTC130.29180695847362514No Hit
CTCTTATACACATCTCCGAGCCCACGAGACTAGGCATGATCTCGTATGCCG110.24691358024691357No Hit
CTTATACACATCTCCGAGCCCACGAGACTAGGCATGATCGCGTATGCCGTC60.13468013468013468No Hit
TCACTAGACATCGTACTACACGACACGTACTACGTTGTAGCTCACTTCCAC50.11223344556677892No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)