FastQCFastQC Report
Sat 17 Dec 2022
EGAF00007546962

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007546962
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences37194868
Sequences flagged as poor quality0
Sequence length35-51
%GC32

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN8515702.289482516781616No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG2224650.5981067065488712No Hit
ATCAAGTTCAGACGTGTGCTCTTCCGAACTTGATN433750.11661555029580963Illumina Multiplexing PCR Primer 2.01 (95% over 24bp)
TGTAGGTTCAGACGTGTGCTCTTCCGAACCTACAN425520.11440287945100383Illumina Multiplexing PCR Primer 2.01 (95% over 23bp)

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)