FastQCFastQC Report
Thu 15 Dec 2022
EGAF00007547257

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007547257
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1301466
Sequences flagged as poor quality0
Sequence length51
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCACAGGGAACGTCACCGATTGGTATCATGCTGCACCAATCGAGGCTGTCT15500.11909646506324406No Hit
CCTCGATTGGTGCAGCATGATACCAATCGGTGACGTTCCCTGTGCCTGTCT14910.1145631157479335No Hit
CCTCGATTGGTGCAGCATGATACCAATCGGTGACGTTCCCTGTGCCCTGTC13740.10557325354638537No Hit
GGCACAGGGAACGTCACCGATTGGTATCATGCTGCACCAATCGAGGCTGTC13660.10495856211380089No Hit
ACTGAGGCGAGCGGTCAAACCCGATCCTCGATTGGTGCAGCATGATACCAA13230.10165459566365928No Hit
GGCACAGGGAACGTCACCGATTGGTATCATGCTGCACCAATCGAGGATCTG13190.10134724994736705No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)