FastQCFastQC Report
Thu 15 Dec 2022
EGAF00007547493

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007547493
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences757667
Sequences flagged as poor quality0
Sequence length51
%GC53

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT14480.19111298235240548No Hit
TCTAGAAGAGAGACGTTACTTTTTTCCGATGTGAATCTACTTCACTCGAAG7920.10453141023695105No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT7890.10413545792544747No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)