FastQCFastQC Report
Thu 15 Dec 2022
EGAF00007547512

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007547512
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences394417
Sequences flagged as poor quality0
Sequence length51
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TCATAATCGGAGGCTTTGGCAACTGACTAGTTCCCCTAATAATCGGTGCCC7210.1828014512559043No Hit
CCTAATTGGGGGGTAGGGGCTAGGCTGGAGTGGTAAAAGGCTCAGAAAAAT6990.17722359837430943No Hit
CATCAATAGATGGAGACATACAGAAATAGTCAAACCACATCTACAAAATGC6160.15617988068465607No Hit
CCTCATACTAGGCCTACTAACCAACACACTAACTATATACCAATGATGGCG5570.14122109341128805No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT5170.1310795427174792No Hit
GCTAAGGGAGGGTAGACTGTTCAACCTGTTCCTGCTCCGGCCTCCACTATA5060.12829061627668178No Hit
GGTAGAGGGGGTGCTATAGGGTAAATACGGGCCCTATTTCAAAGATTTTTA4390.11130351886455199No Hit
GTTCTTGGGTGGGTGTGGGTATAATACTAAGTTGAGATGATATCATTTACG4080.10344381707685013No Hit
ACAGATGATAGGATGTTTCATGTGGTGTATGCATCGGGGTAGTCCGAGTAA4040.10242966200746927No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)