FastQCFastQC Report
Thu 15 Dec 2022
EGAF00007547524

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007547524
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences67529
Sequences flagged as poor quality0
Sequence length51
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT15062.230152971316027No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT8221.217254809045003No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT2960.4383301988775193No Hit
TCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1930.2858031364302744No Hit
GGCGTCTTCGGTTGTTGACTATTTTAACTGCACTATATACATGATTGTCCG1530.2265693257711502No Hit
GTGAATTAGCTGGACATTGATATTGAGCACAACAGCTATGTCAAAAGTAGG1200.17770143197737268No Hit
GGGAGTACCTGGCGTCTTCGGTTGTTGACTATTTTAACTGCACTATATACA950.14068030031542006No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT900.1332760739830295No Hit
GTTTCTTAGCAGGGAATTCAGATTAATAAGATATCTCTATCGCTAGTCGTC710.1051400139199455No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)