FastQCFastQC Report
Thu 15 Dec 2022
EGAF00007547538

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007547538
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences849576
Sequences flagged as poor quality0
Sequence length51
%GC54

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTAATGATGTCGGGGTTGAGGGATAGGAGGAGAATGGGGGATAGGTGTATG11050.1300648794222059No Hit
TCTAGAAGAGAGACGTTACTTTTTTCCGATGTGAATCTACTTCACTCGAAG10770.12676911777168848No Hit
TCATAATCGGAGGCTTTGGCAACTGACTAGTTCCCCTAATAATCGGTGCCC9420.11087883838526512No Hit
ATGTTGTAGCCACAGCTGGAGCCTGAGTCCGCTGCACGGAGACTCTGGTGT9220.1085247229206098No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)