FastQCFastQC Report
Thu 15 Dec 2022
EGAF00007547552

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007547552
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences565042
Sequences flagged as poor quality0
Sequence length51
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CACCAAGTGCCATCTGGTAGCTGCTGTCTCTTATACACATCTCCGAGCCCA9656217.08934911033162No Hit
CACCAAGTGCCAACTGGTAGCTGCTGTCTCTTATACACATCTCCGAGCCCA387486.857543333061968No Hit
CACCAAGTGCCAACTGGTAGCTCCTGTCTCTTATACACATCTCCGAGCCCA86491.530682674916201No Hit
CACCAAGTGCCATCTGGTAGCTCCTGTCTCTTATACACATCTCCGAGCCCA77021.3630845140715204No Hit
CACCAAGTGCCAACCCCATAAATATCGCTATACCTACAGTCACTGCCCAGT38460.6806573670629794No Hit
AACTGGTCGGCTTCAAAGCTGTCTCTTATACACATCTCCGAGCCCACGAGA34430.6093352352568482No Hit
AACTGGTCGGCTTCAACGCTGTCTCTTATACACATCTCCGAGCCCACGAGA32400.5734087023619483No Hit
ACCTCCCCAACGCCATGAATGCGGCCGAGATCACAGACAAGCTGGGGCTGC25140.44492267831417837No Hit
GTGCTGCTGAAAACCTTCAACGCTGTCTCTTATACACATCTCCGAGCCCAC22150.3920062579418875No Hit
NACCAAGTGCCATCTGGTAGCTGCTGTCTCTTATACACATCTCCGAGCCCA17090.30245539269647215No Hit
GTGCTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACAAGAGGCAATC13070.23131023888489705No Hit
TCGCAGTAGACTGTCTCTTATACACATCTCCGAGCCCACGAGACAAGAGGC10460.18511898230574012No Hit
CACCAAGTGCCATCTGGTAGCCTGTCTCTTATACACATCTCCGAGCCCACG8830.15627156919308655No Hit
CACCAAGTGCCATCTGGTAGCTACTGTCTCTTATACACATCTCCGAGCCCA7590.13432629786812306No Hit
NACCAAGTGCCAACTGGTAGCTGCTGTCTCTTATACACATCTCCGAGCCCA7290.12901695803143837No Hit
CACCAAGTGCCATCTGGTAGCTGCTGTCTCTTATACACATCTCCGAGCCCC7270.12866300204232606No Hit
TCATAATCGGAGGCTTTGGCAACTGACTAGTTCCCCTAATAATCGGTGCCC6550.11592058643428275No Hit
CACCAAGTGCCAACTGGTAGCTACTGTCTCTTATACACATCTCCGAGCCCA5800.10264723684257099No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)