FastQCFastQC Report
Thu 15 Dec 2022
EGAF00007547553

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007547553
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences828396
Sequences flagged as poor quality0
Sequence length51
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CACCAAGTGCCATCTGGTAGCTGCTGTCTCTTATACACATCTCCGAGCCCA10449912.614619095215332No Hit
CACCAAGTGCCAACTGGTAGCTGCTGTCTCTTATACACATCTCCGAGCCCA420265.073177562421837No Hit
CACCAAGTGCCAACTGGTAGCTCCTGTCTCTTATACACATCTCCGAGCCCA94031.1350851525116006No Hit
CACCAAGTGCCATCTGGTAGCTCCTGTCTCTTATACACATCTCCGAGCCCA83991.0138870781606864No Hit
AACTGGTCGGCTTCAAAGCTGTCTCTTATACACATCTCCGAGCCCACGAGA36750.4436284096012052No Hit
AACTGGTCGGCTTCAACGCTGTCTCTTATACACATCTCCGAGCCCACGAGA36190.43686835764537735No Hit
CACCAAGTGCCAACCCCATAAATATCGCTATACCTACAGTCACTGCCCAGT26580.3208610374748309No Hit
GTGCTGCTGAAAACCTTCAACGCTGTCTCTTATACACATCTCCGAGCCCAC23820.2875436385496791No Hit
CACCAAGTGCCATCTGGTAGCCTGTCTCTTATACACATCTCCGAGCCCACG20380.2460176051067364No Hit
NACCAAGTGCCATCTGGTAGCTGCTGTCTCTTATACACATCTCCGAGCCCA18040.21777024514845555No Hit
GTGCTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACGTAGAGGAATC15210.18360783972882533No Hit
TCTGGTAGCTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACGTAGAG13330.16091337959140314No Hit
TCGCAGTAGACTGTCTCTTATACACATCTCCGAGCCCACGAGACGTAGAGG13260.16006837309692465No Hit
CACCAAGTGCCATCTGGTCTGTCTCTTATACACATCTCCGAGCCCACGAGA13230.15970622745643387No Hit
GCCAACTGGTAGCTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACGT13060.15765406882698613No Hit
CACCAAGTGCCATCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGTA12030.14522040183680268No Hit
ACCTCCCCAACGCCATGAATGCGGCCGAGATCACAGACAAGCTGGGGCTGC11910.14377181927483956No Hit
GCGTCAGATGTGTATAAGAGACAGCACCAAGTGCCATCTGGTAGCTGCTGT10810.13049314579017765No Hit
CACCAAGTGCCATCTGGTAGCTGCTGTCTCTTATACACATCTCCGAGCCCT9190.11093728120367553No Hit
CACCAAGTGCCATCTGGTAGCTACTGTCTCTTATACACATCTCCGAGCCCA8290.10007291198895214No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)