FastQCFastQC Report
Thu 15 Dec 2022
EGAF00007547557

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007547557
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1030065
Sequences flagged as poor quality0
Sequence length51
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CACCAAGTGCCATCTGGTAGCTGCTGTCTCTTATACACATCTCCGAGCCCA869128.437525787207603No Hit
CACCAAGTGCCAACTGGTAGCTGCTGTCTCTTATACACATCTCCGAGCCCA365303.546378141185265No Hit
CACCAAGTGCCAACTGGTAGCTCCTGTCTCTTATACACATCTCCGAGCCCA77680.7541271667321966No Hit
CACCAAGTGCCATCTGGTAGCTCCTGTCTCTTATACACATCTCCGAGCCCA67450.6548130457786645No Hit
AACTGGTCGGCTTCAAAGCTGTCTCTTATACACATCTCCGAGCCCACGAGA30780.29881609412998206No Hit
AACTGGTCGGCTTCAACGCTGTCTCTTATACACATCTCCGAGCCCACGAGA28010.2719245872833268No Hit
CACCAAGTGCCATCTGGTAGCCTGTCTCTTATACACATCTCCGAGCCCACG24240.23532495522127242No Hit
GTGCTGCTGAAAACCTTCAACGCTGTCTCTTATACACATCTCCGAGCCCAC20470.19872532315921812No Hit
TCTGGTAGCTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCCTGA15350.1490197220563751No Hit
GTTCTAAGTTGGTCGTTAAGCGCACGCCGGACGGCCGAAGCCTGCCAAGGG15350.1490197220563751No Hit
NACCAAGTGCCATCTGGTAGCTGCTGTCTCTTATACACATCTCCGAGCCCA15110.14668977200467934No Hit
GCCAACTGGTAGCTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACTC14930.1449423094659075No Hit
CACCAAGTGCCATCTGGTCTGTCTCTTATACACATCTCCGAGCCCACGAGA14150.13736997179789626No Hit
CACCAAGTGCCATCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCC13110.12727352157388125No Hit
GTGCTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCCTGAGCATC12900.12523481527864747No Hit
TCGCAGTAGACTGTCTCTTATACACATCTCCGAGCCCACGAGACTCCTGAG12240.1188274526364841No Hit
GCGTCAGATGTGTATAAGAGACAGCACCAAGTGCCATCTGGTAGCTGCTGT12040.1168858275934043No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)