FastQCFastQC Report
Thu 15 Dec 2022
EGAF00007547562

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007547562
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1018589
Sequences flagged as poor quality0
Sequence length51
%GC53

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CACCAAGTGCCATCTGGTAGCTGCTGTCTCTTATACACATCTCCGAGCCCA978419.605542569181486No Hit
CACCAAGTGCCAACTGGTAGCTGCTGTCTCTTATACACATCTCCGAGCCCA418734.110882799637538No Hit
CACCAAGTGCCAACTGGTAGCTCCTGTCTCTTATACACATCTCCGAGCCCA80260.7879527463972221No Hit
CACCAAGTGCCATCTGGTAGCTCCTGTCTCTTATACACATCTCCGAGCCCA63870.6270438812906874No Hit
AACTGGTCGGCTTCAAAGCTGTCTCTTATACACATCTCCGAGCCCACGAGA38530.378268369283391No Hit
AACTGGTCGGCTTCAACGCTGTCTCTTATACACATCTCCGAGCCCACGAGA33990.33369690817395437No Hit
CACCAAGTGCCATCTGGTAGCCTGTCTCTTATACACATCTCCGAGCCCACG24870.24416128585720048No Hit
GTGCTGCTGAAAACCTTCAACGCTGTCTCTTATACACATCTCCGAGCCCAC23310.22884598203986103No Hit
GCCAACTGGTAGCTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACGC20780.20400770084891945No Hit
TCTGGTAGCTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACGCTACG19140.18790699683581896No Hit
CACCAAGTGCCATCTGGTCTGTCTCTTATACACATCTCCGAGCCCACGAGA17250.16935191721096537No Hit
NACCAAGTGCCATCTGGTAGCTGCTGTCTCTTATACACATCTCCGAGCCCA15690.15403661339362587No Hit
GCGTCAGATGTGTATAAGAGACAGCACCAAGTGCCATCTGGTAGCTGCTGT15350.15069866256164163No Hit
GTGCTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACGCTACGCTATC14210.1395067097720474No Hit
CACCAAGTGCCATCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGCT13670.13420525845066067No Hit
CACCAAGTGCCATCTGGTAGCTGCTGTCTCTTATACACATCTCCGAGCCCT12050.11830090448650044No Hit
CACCAAGTGCCATCTGGTAGCTGCTGTCTCTTATACACATCTCCGAGCCCC11530.11319580321405395No Hit
ACCTCCCCAACGCCATGAATGCGGCCGAGATCACAGACAAGCTGGGGCTGC11120.10917062721077883No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)