FastQCFastQC Report
Thu 15 Dec 2022
EGAF00007547567

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007547567
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences636057
Sequences flagged as poor quality0
Sequence length51
%GC55

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CACCAAGTGCCATCTGGTAGCTGCTGTCTCTTATACACATCTCCGAGCCCA7942712.48740285854884No Hit
CACCAAGTGCCAACTGGTAGCTGCTGTCTCTTATACACATCTCCGAGCCCA329505.180353333113227No Hit
CACCAAGTGCCATCTGGTAGCTCCTGTCTCTTATACACATCTCCGAGCCCA77731.2220602870497457No Hit
CACCAAGTGCCAACTGGTAGCTCCTGTCTCTTATACACATCTCCGAGCCCA76411.2013074299944815No Hit
CACCAAGTGCCATCTGGTAGCCTGTCTCTTATACACATCTCCGAGCCCACG56300.8851407971298169No Hit
TCTGGTAGCTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGTACT36030.5664586664402719No Hit
CACCAAGTGCCATCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGT35570.5592266101937405No Hit
GCGTCAGATGTGTATAAGAGACAGCACCAAGTGCCATCTGGTAGCTGCTGT33340.5241668592594689No Hit
AACTGGTCGGCTTCAACGCTGTCTCTTATACACATCTCCGAGCCCACGAGA30680.48234670792083095No Hit
CACCAAGTGCCATCTGGTCTGTCTCTTATACACATCTCCGAGCCCACGAGA27690.43533834231837715No Hit
AACTGGTCGGCTTCAAAGCTGTCTCTTATACACATCTCCGAGCCCACGAGA25320.3980775307873351No Hit
GCCAACTGGTAGCTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACCG25250.39697700048894985No Hit
CACCAAGTGCCAACTGGTAGCCTGTCTCTTATACACATCTCCGAGCCCACG21300.3348756479372132No Hit
GTGCTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGTACTAGATC19770.31082119998679364No Hit
TCGCAGTAGACTGTCTCTTATACACATCTCCGAGCCCACGAGACCGTACTA18940.2977720550202262No Hit
GTGCTGCTGAAAACCTTCAACGCTGTCTCTTATACACATCTCCGAGCCCAC18340.2883389381769244No Hit
GCCATCTGGTAGCTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACCG16510.259567931804854No Hit
CACCAAGTGCCATCTGGTAGCTGCTGTCTCTTATACACATCTCCGAGCCCT16060.25249309417237764No Hit
GCGTCAGATGTGTATAAGAGACAGCACCAAGTGCCAACTGGTAGCTGCTGT15320.24085891673230544No Hit
NACCAAGTGCCATCTGGTAGCTGCTGTCTCTTATACACATCTCCGAGCCCA13610.21397453372889536No Hit
AGTGCCATCTGGTAGCTGCTGTCTCTTATACACATCTCCGAGCCCACGAGA13490.21208791036023503No Hit
CACCAAGTGCCATCTGGCTGTCTCTTATACACATCTCCGAGCCCACGAGAC12610.19825267232339241No Hit
GTTCTAAGTTGGTCGTTAAGCGCACGCCGGACGGCCGAAGCCTGCCAAGGG10160.15973411187991013No Hit
ACTGGTAGCTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGTACT9930.15611808375664446No Hit
CACCAAGTGCCATCTGGTAGCTACTGTCTCTTATACACATCTCCGAGCCCA9790.15391702315987402No Hit
CACCAAGTGCCAACCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGT9160.14401225047440716No Hit
CACCAAGTGCCATCTGGTAGCTGCTGTCTCTTATACACATCTCCGAGCCCC8870.1394529106668113No Hit
CACCAAGTGCCAACTGGTCTGTCTCTTATACACATCTCCGAGCCCACGAGA8460.1330069474905551No Hit
CCAAGTGCCATCTGGTAGCTGCTGTCTCTTATACACATCTCCGAGCCCACG8160.1282903890689042No Hit
CACCAAGTGCCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGTACT7540.11854283499749237No Hit
CACCAAGTGCCAACTGGTAGCTACTGTCTCTTATACACATCTCCGAGCCCA7440.11697064885694208No Hit
CACCAAGTGCCAACTGGTAGCTGCTGTCTCTTATACACATCTCCGAGCCCT6850.1076947506276953No Hit
GCTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGTACTAGATCTC6410.10077713160927401No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)