FastQCFastQC Report
Thu 15 Dec 2022
EGAF00007547568

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007547568
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences292391
Sequences flagged as poor quality0
Sequence length51
%GC54

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CACCAAGTGCCATCTGGTAGCTGCTGTCTCTTATACACATCTCCGAGCCCA5272418.032018769387566No Hit
CACCAAGTGCCAACTGGTAGCTGCTGTCTCTTATACACATCTCCGAGCCCA212897.281003861267959No Hit
CACCAAGTGCCAACTGGTAGCTCCTGTCTCTTATACACATCTCCGAGCCCA44061.5068863268705261No Hit
CACCAAGTGCCATCTGGTAGCTCCTGTCTCTTATACACATCTCCGAGCCCA38891.3300682989558503No Hit
CACCAAGTGCCATCTGGTAGCCTGTCTCTTATACACATCTCCGAGCCCACG34821.1908711280442967No Hit
TCTGGTAGCTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACAGGCAG21600.7387368284249516No Hit
CACCAAGTGCCATCTGGTCTGTCTCTTATACACATCTCCGAGCCCACGAGA21080.7209524232962027No Hit
CACCAAGTGCCATCCTGTCTCTTATACACATCTCCGAGCCCACGAGACAGG20940.716164314223078No Hit
GCCAACTGGTAGCTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACAG20320.6949598311849544No Hit
AACTGGTCGGCTTCAAAGCTGTCTCTTATACACATCTCCGAGCCCACGAGA20260.6929077844393295No Hit
AACTGGTCGGCTTCAACGCTGTCTCTTATACACATCTCCGAGCCCACGAGA19320.6607590520912066No Hit
GCGTCAGATGTGTATAAGAGACAGCACCAAGTGCCATCTGGTAGCTGCTGT17890.6118519379871474No Hit
GTGCTGCTGAAAACCTTCAACGCTGTCTCTTATACACATCTCCGAGCCCAC13670.46752465021153183No Hit
CACCAAGTGCCAACTGGTAGCCTGTCTCTTATACACATCTCCGAGCCCACG11970.40938332575216063No Hit
GCCATCTGGTAGCTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACAG9670.3307215338365408No Hit
NACCAAGTGCCATCTGGTAGCTGCTGTCTCTTATACACATCTCCGAGCCCA8880.30370291835248003No Hit
GCGTCAGATGTGTATAAGAGACAGCACCAAGTGCCAACTGGTAGCTGCTGT8820.30165087160685516No Hit
CACCAAGTGCCATCTGGCTGTCTCTTATACACATCTCCGAGCCCACGAGAC8790.3006248482340428No Hit
GTGCTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACAGGCAGAAATC8720.2982307936974804No Hit
CACCAAGTGCCATCTGGTAGCTGCTGTCTCTTATACACATCTCCGAGCCCT8610.2944687079971682No Hit
TCGCAGTAGACTGTCTCTTATACACATCTCCGAGCCCACGAGACAGGCAGA8300.28386646647810637No Hit
AGTGCCATCTGGTAGCTGCTGTCTCTTATACACATCTCCGAGCCCACGAGA7860.26881812367685737No Hit
ACTGGTAGCTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACAGGCAG5690.19460243304342473No Hit
CCAAGTGCCATCTGGTAGCTGCTGTCTCTTATACACATCTCCGAGCCCACG5060.17305594221436366No Hit
CACCAAGTGCCAACTGGTCTGTCTCTTATACACATCTCCGAGCCCACGAGA4740.16211169290436436No Hit
CACCAAGTGCCAACCTGTCTCTTATACACATCTCCGAGCCCACGAGACAGG4620.15800759941311462No Hit
CACCAAGTGCCATCTGGTAGCTACTGTCTCTTATACACATCTCCGAGCCCA4350.14877338905780274No Hit
CACCAAGTGCCCTGTCTCTTATACACATCTCCGAGCCCACGAGACAGGCAG4200.14364327219374057No Hit
CACCAAGTGCCAACTGGTAGCTGCTGTCTCTTATACACATCTCCGAGCCCT3770.12893693718342905No Hit
GTGCCATCTGGTAGCTGCTGTCTCTTATACACATCTCCGAGCCCACGAGAC3670.12551685927405426No Hit
NACCAAGTGCCAACTGGTAGCTGCTGTCTCTTATACACATCTCCGAGCCCA3600.1231228047374919No Hit
CACCAAGTGCCAACTGGTAGCTACTGTCTCTTATACACATCTCCGAGCCCA3500.11970272682811714No Hit
GCTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACAGGCAGAAATCTC3470.1186767034553047No Hit
CCAAGTGCCAACTGGTAGCTGCTGTCTCTTATACACATCTCCGAGCCCACG3390.11594064112780489No Hit
CACCAAGTGCCATCTGGTAGCTGCTGTCTCTTATACACATCTCCGAGCCCC3390.11594064112780489No Hit
AGTGCCAACTGGTAGCTGCTGTCTCTTATACACATCTCCGAGCCCACGAGA3250.11115253205468022No Hit
CACCAAGTGCCATCTGGTAGCTGCTGTCTCTTATACACATCTCCGAGCCTG3130.10704843856343046No Hit
CACCAAGTGCCATCTGGTAGCTGCTGTCTCTTATACACATCTCCGAGCTGT3070.10499639181780561No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)