FastQCFastQC Report
Thu 15 Dec 2022
EGAF00007547574

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007547574
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences967256
Sequences flagged as poor quality0
Sequence length51
%GC54

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CACCAAGTGCCATCTGGTAGCTGCTGTCTCTTATACACATCTCCGAGCCCA10272510.620249447922783No Hit
CACCAAGTGCCAACTGGTAGCTGCTGTCTCTTATACACATCTCCGAGCCCA427084.415377108025177No Hit
CACCAAGTGCCAACTGGTAGCTCCTGTCTCTTATACACATCTCCGAGCCCA80980.837213726252409No Hit
CACCAAGTGCCATCTGGTAGCTCCTGTCTCTTATACACATCTCCGAGCCCA68770.7109803402615233No Hit
AACTGGTCGGCTTCAAAGCTGTCTCTTATACACATCTCCGAGCCCACGAGA43100.44559041246577946No Hit
AACTGGTCGGCTTCAACGCTGTCTCTTATACACATCTCCGAGCCCACGAGA35360.3655702316656604No Hit
CACCAAGTGCCATCTGGTAGCCTGTCTCTTATACACATCTCCGAGCCCACG30350.3137742231632577No Hit
GTGCTGCTGAAAACCTTCAACGCTGTCTCTTATACACATCTCCGAGCCCAC25260.2611511326887608No Hit
GCCAACTGGTAGCTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACGC24390.25215661624223573No Hit
TCTGGTAGCTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACGCTACG23440.2423350178236165No Hit
CACCAAGTGCCATCTGGTCTGTCTCTTATACACATCTCCGAGCCCACGAGA20430.2112160586235702No Hit
NACCAAGTGCCATCTGGTAGCTGCTGTCTCTTATACACATCTCCGAGCCCA17290.1787530912188707No Hit
CACCAAGTGCCATCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGCT16980.1755481485770055No Hit
GCGTCAGATGTGTATAAGAGACAGCACCAAGTGCCATCTGGTAGCTGCTGT15020.15528464026069624No Hit
GTGCTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACGCTACGCTATC14520.15011537793510715No Hit
CACCAAGTGCCATCTGGTAGCTGCTGTCTCTTATACACATCTCCGAGCCCC11100.11475762362807777No Hit
TCGCAGTAGACTGTCTCTTATACACATCTCCGAGCCCACGAGACGCTACGC10690.11051882852109474No Hit
CACCAAGTGCCATCTGGTAGCTGCTGTCTCTTATACACATCTCCGAGCCCT10630.10989851704202404No Hit
GTTCTAAGTTGGTCGTTAAGCGCACGCCGGACGGCCGAAGCCTGCCAAGGG10320.1066935744001588No Hit
GCCATCTGGTAGCTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACGC9850.10183446781410505No Hit
CACCAAGTGCCAACTGGTAGCCTGTCTCTTATACACATCTCCGAGCCCACG9770.1010073858420108No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)