FastQCFastQC Report
Thu 15 Dec 2022
EGAF00007547599

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007547599
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences715475
Sequences flagged as poor quality0
Sequence length51
%GC53

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CACCAAGTGCCATCTGGTAGCTGCTGTCTCTTATACACATCTCCGAGCCCA7604010.62790453894266No Hit
CACCAAGTGCCAACTGGTAGCTGCTGTCTCTTATACACATCTCCGAGCCCA299594.187288165204934No Hit
CACCAAGTGCCAACTGGTAGCTCCTGTCTCTTATACACATCTCCGAGCCCA64960.9079282993815296No Hit
CACCAAGTGCCATCTGGTAGCTCCTGTCTCTTATACACATCTCCGAGCCCA56300.7868898284356546No Hit
AACTGGTCGGCTTCAAAGCTGTCTCTTATACACATCTCCGAGCCCACGAGA34640.4841538837835005No Hit
AACTGGTCGGCTTCAACGCTGTCTCTTATACACATCTCCGAGCCCACGAGA29770.416087214787379No Hit
GTGCTGCTGAAAACCTTCAACGCTGTCTCTTATACACATCTCCGAGCCCAC20660.28875921590551734No Hit
CACCAAGTGCCATCTGGTAGCCTGTCTCTTATACACATCTCCGAGCCCACG18300.25577413606345434No Hit
GCCAACTGGTAGCTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACCG13700.19148118382892484No Hit
TCTGGTAGCTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGAGGC12740.17806352423215346No Hit
GTGCTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGAGGCTGATC12610.1762465494950907No Hit
CACCAAGTGCCATCTGGTCTGTCTCTTATACACATCTCCGAGCCCACGAGA12260.17135469443376777No Hit
NACCAAGTGCCATCTGGTAGCTGCTGTCTCTTATACACATCTCCGAGCCCA12110.16925818512177224No Hit
GCGTCAGATGTGTATAAGAGACAGCACCAAGTGCCATCTGGTAGCTGCTGT10960.15318494706313987No Hit
CACCAAGTGCCATCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGA10240.14312170236556132No Hit
TCGCAGTAGACTGTCTCTTATACACATCTCCGAGCCCACGAGACCGAGGCT8880.12411335127013523No Hit
CACCAAGTGCCATCTGGTAGCTGCTGTCTCTTATACACATCTCCGAGCCCC8350.1167056850344177No Hit
TCATAATCGGAGGCTTTGGCAACTGACTAGTTCCCCTAATAATCGGTGCCC7890.11027638981096476No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)