FastQCFastQC Report
Thu 15 Dec 2022
EGAF00007547619

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007547619
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences854260
Sequences flagged as poor quality0
Sequence length51
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CACCAAGTGCCATCTGGTAGCTGCTGTCTCTTATACACATCTCCGAGCCCA220382.5797766487954488No Hit
CACCAAGTGCCAACTGGTAGCTGCTGTCTCTTATACACATCTCCGAGCCCA93841.0984946035164938No Hit
CACCAAGTGCCATCTGGTAGCTCCTGTCTCTTATACACATCTCCGAGCCCA23480.2748577716386112No Hit
CACCAAGTGCCAACTGGTAGCTCCTGTCTCTTATACACATCTCCGAGCCCA22550.2639711563224311No Hit
CACCAAGTGCCATCTGGTAGCCTGTCTCTTATACACATCTCCGAGCCCACG18180.21281577037435911No Hit
GCGTCAGATGTGTATAAGAGACAGCACCAAGTGCCATCTGGTAGCTGCTGT14640.17137639594502846No Hit
TCTGGTAGCTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACTAGGCA11230.13145880645236813No Hit
CACCAAGTGCCATCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTAG9680.11331444759206798No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)