FastQCFastQC Report
Sat 25 May 2024
EGAF00007612992

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007612992
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences217245738
Total Bases16.7 Gbp
Sequences flagged as poor quality0
Sequence length8-101
%GC35

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGANNNNN7604200.3500275802879042No Hit
AGNNNNNN2703680.12445261411756672No Hit
CGGGTTTACGTTATTTTTTTGTTTTAGTTTTTCGAGTAGTTGGGATTATA2377690.10944702629793364No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)