FastQCFastQC Report
Thu 23 May 2024
EGAF00007613164

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007613164
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences152548102
Total Bases12.4 Gbp
Sequences flagged as poor quality0
Sequence length8-101
%GC34

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGANNNNN14812790.9710242084821219No Hit
AGNNNNNN7718270.5059564752893484No Hit
TGTTTTTTTGATTTAGGAAGAGCA2665920.17475930313443033No Hit
GTTTTTTTGATTTAGGAAGAGC1893760.12414182642534616No Hit
TAGANNNN1809060.11858947940237238No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)