FastQCFastQC Report
Wed 15 May 2024
EGAF00007645360

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007645360
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences51596049
Total Bases7.3 Gbp
Sequences flagged as poor quality0
Sequence length35-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTGCGCGC825390.15997155131006252No Hit
CTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATT664170.12872497272029493No Hit
GTGCGATCGGCCCGAGGTTATCTAGAGTCACCAAAGCCGCCGGCGCCCGC649960.12597088587151314No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)