FastQCFastQC Report
Thu 15 Dec 2022
EGAF00007661283

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007661283
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4110649
Sequences flagged as poor quality0
Sequence length89-101
%GC62

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTCGGGGCGGCGGCGGCGGCGGCGGTGGCGGCGGCGGCGGCGGCGGCGG126430.3075670046262768No Hit
CGCGTGTGGTGTGCGTCGGAGGGCGGCGGCGGCGGCGGCGGCGGGGGTGT64900.15788261172384213No Hit
GGTCGGGGCGGCGGCGGCGGTGGCGGCGGCGGCGGCGGCGGCGGGACCGA58070.141267230551672No Hit
GGTCTCGCTCCCTCGGCCCCGGGATTCGGCGAGTGCTGCTGCCGGGGGGG53540.13024707290746546No Hit
GGGCGGCGGCGGCGGCGGCGGTGGCGGCGGCGGCGGCGGCGGCGGGACCG42960.10450904467883294No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)