FastQCFastQC Report
Sat 17 Dec 2022
EGAF00007661307

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007661307
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26276085
Sequences flagged as poor quality0
Sequence length88-101
%GC58

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATGAATGGCTCCACGAGGGTTCAGCTGTCTCTTACTTTTAACCAGTGA421990.16059850620821176No Hit
CGCGTGTGGTGTGCGTCGGAGGGCGGCGGCGGCGGCGGCGGCGGGGGTGT316500.12045173396265084No Hit
GTCATGCCCGCCTCTTCACGGGCAGGTCAATTTCACTGGTTAAAAGTAAG293750.11179367093689947No Hit
CACACACACACACACACACACACACACACACACACACACACACACACACA271900.1034781246901888No Hit
CCATAGGGTCTTCTCGTCTTGCTGTGTCATGCCCGCCTCTTCACGGGCAG271170.10320030552496691No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)