FastQCFastQC Report
Thu 15 Dec 2022
EGAF00007661427

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007661427
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12125156
Sequences flagged as poor quality0
Sequence length88-101
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATGAATGGCTCCACGAGGGTTCAGCTGTCTCTTACTTTTAACCAGTGA232330.19160990588492222No Hit
GTCATGCCCGCCTCTTCACGGGCAGGTCAATTTCACTGGTTAAAAGTAAG196740.16225770621013041No Hit
CACACACACACACACACACACACACACACACACACACACACACACACACA174260.14371773855940492No Hit
GTGTCATGCCCGCCTCTTCACGGGCAGGTCAATTTCACTGGTTAAAAGTA164580.13573433611905694No Hit
CCATAGGGTCTTCTCGTCTTGCTGTGTCATGCCCGCCTCTTCACGGGCAG160020.13197355976285996No Hit
CTTCACGGGCAGGTCAATTTCACTGGTTAAAAGTAAGAGACAGCTGAACC142890.11784590647740945No Hit
CCTCTTCACGGGCAGGTCAATTTCACTGGTTAAAAGTAAGAGACAGCTGA125590.10357804881025862No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)