FastQCFastQC Report
Fri 6 Jan 2023
EGAF00007680713

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007680713
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences557259444
Sequences flagged as poor quality0
Sequence length101
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TCTTAATTGAGGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT35155170.6308582183490101No Hit
TCTTAATTGAGTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA16704020.299753017734411No Hit
TCTTAATTGAGGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC11898430.21351688388792922No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)