FastQCFastQC Report
Fri 6 Jan 2023
EGAF00007680716

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007680716
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences545402985
Sequences flagged as poor quality0
Sequence length101
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GAGTATAGGGTGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT23970090.4394931941929141No Hit
GAGTATAGGGTTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA11496840.21079532595517422No Hit
GAGTATAGGGTGTACGCTGGACTTTGTGGGATACCCTCGCTTTCCTGCTC8903540.16324699799726985No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)