FastQCFastQC Report
Fri 16 Dec 2022
EGAF00007680851

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007680851
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences401278281
Sequences flagged as poor quality0
Sequence length151
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGGATCGTGTCAGTACGTACGAGTCTTGAGCTCTGTACTCGCAGTAGTC4743780.1182167145497715No Hit
TTCCAGGGGTCTTCCTTAATCTGTCTCTTATACACATCTCCGAGCCCACG4729690.11786558665007837No Hit
CGGCTCGGATATATACTCTGTCTCTTATACACATCTCCGAGCCCACGAGA4363360.10873651046167634No Hit
TAGTCAGACGTCAGTACGTACGAGTCTGGTTATACGTACTCGCAGTAGTC4249130.10588985751760634No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)