FastQCFastQC Report
Fri 16 Dec 2022
EGAF00007698528

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007698528
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences433205765
Sequences flagged as poor quality0
Sequence length8
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GAAGGCTG11908765027.489858081643952No Hit
TGGATTGC11903579527.477888019334184No Hit
ATTCCGAT10986305725.360478986238792No Hit
CCCTAACA7961059018.377084617052592No Hit
GGGATTGC6154330.14206482224445927No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)