FastQCFastQC Report
Fri 16 Dec 2022
EGAF00007698529

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007698529
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences433205765
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGGATATGGGTACGGCCCGGCGCG12518610.2889760712210282No Hit
TGCCCTCCAATGGATCCTCGTTAAAGGA11025330.25450561582438774No Hit
AAGCCGCAGGCTCCACTCCTGGTGGTGC9180760.21192608090060852No Hit
CCTTTAAGTTTCAGCTTTGCAACCATAC6998420.1615495583259378No Hit
CGTTCGTTATCGGAATTAACCAGACAAA6665840.15387237517487792No Hit
GTCTCGTTCGTTATCGGAATTAACCAGA5862090.13531883630403674No Hit
CCACCTACTAAGAACGGCCATGCACCAC5237020.12088989628288996No Hit
GGGGTCTGATGAGCGTCGGCATCGGGCG5055610.11670227888126096No Hit
GGTCCGTCTTGCGCCGGTCCAAGAATTT4861990.11223280927482578No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)