FastQCFastQC Report
Sat 17 Dec 2022
EGAF00007698531

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007698531
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences170280849
Sequences flagged as poor quality0
Sequence length8
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTCGCCCT5091943129.903204793159095No Hit
CCGATTAA4162033024.4421673044395No Hit
GGATGGGC3923342823.040423060141073No Hit
AATCAATG3609765421.198892425066543No Hit
TTCGCCCA4614250.27097879926591156No Hit
CCGATAAA2958970.17376998161431528No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)