Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00007699021 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 90847864 |
Sequences flagged as poor quality | 0 |
Sequence length | 76 |
%GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
ATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTGCCTCTATGTGTAGATCTC | 554475 | 0.6103335572094464 | Illumina Single End PCR Primer 1 (96% over 31bp) |
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTGCCTCTATGTGTAGATCT | 195899 | 0.21563412872315854 | Illumina Single End PCR Primer 1 (96% over 32bp) |
CGGAAACCTTGTTACGACTTTTACTTCCTCTAGATAGTCAAGTTCGACCG | 174707 | 0.19230721814218987 | No Hit |
CCGGGCCCGGCGCGCCGGGGGCCGCTACCGGCCTCACACCGTCCACGGGC | 127392 | 0.14022564140858612 | No Hit |
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 121050 | 0.13324473979927587 | No Hit |