FastQCFastQC Report
Wed 22 Feb 2023
EGAF00007699849

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007699849
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences93410823
Sequences flagged as poor quality0
Sequence length76
%GC50

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTAACACGTGCGCGAGTCGGGGGCTCGCACGAAAGCCGCCGTGGCGCA2570530.27518545682870177No Hit
CTAACACGTGCGCGAGTCGGGGGCTCGCACGAAAGCCGCCGTGGCGCAAT1425750.15263220622732335No Hit
GTCGGGTTCAGATCCCCGAATCCGGAGTGGCGGAGATGGGCGCCGCGAGG992870.10629068111304403No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)