FastQCFastQC Report
Wed 22 Feb 2023
EGAF00007699930

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007699930
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences97555259
Sequences flagged as poor quality0
Sequence length76
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCGGAAGAGCACACGTCTGAACTCCAGTCACGAGATTCCATCTCGTATG1444580.14807812667485204TruSeq Adapter, Index 7 (97% over 37bp)
CCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATG993520.10184176744382381No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)